BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025D05SP1|AL428371
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1607 1758 0.0
>3x_Contig1607
Length = 10159
Score = 1758 bits (884), Expect = 0.0
Identities = 895/900 (99%), Gaps = 1/900 (0%)
Strand = Plus / Plus
Query: 1 gatcggaaatatgccttgatacgtacagataacggatgggctctaagtcttacgggtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8600 gatcggaaatatgccttgatacgtacagataacggatgggctctaagtcttacgggtaac 8659
Query: 61 gatgggtcagaatccactaaggcaataaagttagatgaagacgaagaagaggatgcgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8660 gatgggtcagaatccactaaggcaataaagttagatgaagacgaagaagaggatgcgagc 8719
Query: 121 cagctagattgggaagaagttgataccaaaccaaaacccaagaaaaaacaactggattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8720 cagctagattgggaagaagttgataccaaaccaaaacccaagaaaaaacaactggattat 8779
Query: 181 tcgatgaacgcttctttgttgcctcgcttatcaacaactaagacacaaggtggaagtcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8780 tcgatgaacgcttctttgttgcctcgcttatcaacaactaagacacaaggtggaagtcaa 8839
Query: 241 tcgttttttgataagagacctgaccttgcacctagtacgtcacatttactcgacgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8840 tcgttttttgataagagacctgaccttgcacctagtacgtcacatttactcgacgaagat 8899
Query: 301 gaggacgacggaacaaatgaccatcctgccgttaataatgtcgaaaaggaagacgataac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8900 gaggacgacggaacaaatgaccatcctgccgttaataatgtcgaaaaggaagacgataac 8959
Query: 361 gatagtwacgaagatgactatgcgatgttgttgaaagagacaaaagcgatgtcagaatat 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8960 gatagtaacgaagatgactatgcgatgttgttgaaagagacaaaagcgatgtcagaatat 9019
Query: 421 caaagaagacaaaaagagttaccggttcaaaaaaatatcataccacaggtggaggtaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9020 caaagaagacaaaaagagttaccggttcaaaaaaatatcataccacaggtggaggtaaac 9079
Query: 481 atcgaaagcacggaatcagagtcagatggagagttcgaagacgtcaacttcaaaccaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9080 atcgaaagcacggaatcagagtcagatggagagttcgaagacgtcaacttcaaaccaacc 9139
Query: 541 gttattagtaattctgawggcgggccttctaattcagctgcgcatagaccatcgaatgat 600
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9140 gttattagtaattctgaaggcgggccttctaattcagctgcgcatagaccatcgaatgat 9199
Query: 601 aacactgtttcttcgatagtggaaawacctagtgccattccaataattgaccataaggtg 660
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9200 aacactgtttcttcgatagtggaaaaacctagtgccattccaataattgaccataaggtg 9259
Query: 661 tcccagcaaaatcttgattcaattgtcagtaagataccggaattctctttttcattgagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9260 tcccagcaaaatcttgattcaattgtcagtaagataccggaattctctttttcattgagt 9319
Query: 721 atgagaggtaaggcgtttgaagacaacgaaaaatcagagccaggggaaactgctccgaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9320 atgagaggtaaggcgtttgaagacaacgaaaaatcagagccaggggaaactgctccgaca 9379
Query: 781 tcaactgatactcaagagaaacaggctcaggaagttccagcgtggttctcctccaccgcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9380 tcaactgatactcaagagaaacaggctcaggaagttccagcgtggttctcctccaccgcc 9439
Query: 841 aatagaaacccatattcgagcagctctttcgtcgcagataggggagaagagtgatgtwag 900
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 9440 aatagaaacccatattcgagcagctctttcgtcgcagata-gggagaagagtgatgtaag 9498
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6817
Number of Sequences: 1807
Number of extensions: 6817
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)